BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E12LP1|AL426058
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 1604 0.0
>3x_Contig1624
Length = 12551
Score = 1604 bits (809), Expect = 0.0
Identities = 818/821 (99%)
Strand = Plus / Minus
Query: 1 gatcttgcaaataatcatggataaaatggtggatattggcaaacctgattttgacattac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3649 gatcttgcaaataatcatggataaaatggtggatattggcaaacctgattttgacattac 3590
Query: 61 aaacagcatgtttagacacagtagaatccttgtgcgttctaaatacgaggaagcagcaag 120
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 3589 aaacagcatgtttagacacagtagaatccttgtgcgtactaaatacgaggaagcagcaag 3530
Query: 121 agcaaattcatgtacgctggcatcattaggggtgttgatccttttagagaaggagttaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3529 agcaaattcatgtacgctggcatcattaggggtgttgatccttttagagaaggagttaac 3470
Query: 181 aacgttggaagaacgattggatgcgttagaagatattgacattgagtccttcaaaatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3469 aacgttggaagaacgattggatgcgttagaagatattgacattgagtccttcaaaatgtt 3410
Query: 241 ctgtaaggacctatggatccccaagtctaattacatgaacctcgtcatccagggggatct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3409 ctgtaaggacctatggatccccaagtctaattacatgaacctcgtcatccagggggatct 3350
Query: 301 ctcgattgctgaaacggtgaatcagtatatggatggtataattcatcacttgtctggccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3349 ctcgattgctgaaacggtgaatcagtatatggatggtataattcatcacttgtctggccc 3290
Query: 361 aaacgtgaattaaacctcggtgttccgattaagagagcccgaaacaattaaactggcaca 420
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3289 aaacgtgaatcaaacctcggtgttccgattaagagagcccgaaacaattaaactggcaca 3230
Query: 421 aggcagccattttttcatcgagatgaccagcttcaaagaggatccaacaaacagtgttgt 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3229 aggcagcaattttttcatcgagatgaccagcttcaaagaggatccaacaaacagtgttgt 3170
Query: 481 atatttcattgagactggtgatagaacgaacccagtagattacactatgagtagtctttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3169 atatttcattgagactggtgatagaacgaacccagtagattacactatgagtagtctttt 3110
Query: 541 cgaatacttcatgtccatgacacttgtgccagatttacgaaacaagaaacagatcggata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3109 cgaatacttcatgtccatgacacttgtgccagatttacgaaacaagaaacagatcggata 3050
Query: 601 cgtggtacttggaggactgaggcttttaacagacacgttaggtatacatatctcggtaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3049 cgtggtacttggaggactgaggcttttaacagacacgttaggtatacatatctcggtaat 2990
Query: 661 gtccaacctaccgccacataccatcgaagacagaattgaggaatatctatactaccttga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2989 gtccaacctaccgccacataccatcgaagacagaattgaggaatatctatactaccttga 2930
Query: 721 aaccaacgtactaggtgcgatgacagaagctgagtttcaagataatattctgcaaaaata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2929 aaccaacgtactaggtgcgatgacagaagctgagtttcaagataatattctgcaaaaata 2870
Query: 781 catgcagttgattaaatccaattccttggaaaaattaatca 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 2869 catgcagttgattaaatccaattccttggaaaaattaatca 2829
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5555
Number of Sequences: 1807
Number of extensions: 5555
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)